JMcmprsk: An R Package for Joint Modelling of Longitudinal and Survival Data with Competing Risks

Abstract:

In this paper, we describe an R package named JMcmprsk, for joint modelling of longitudinal and survival data with competing risks. The package in its current version implements two joint models of longitudinal and survival data proposed to handle competing risks survival data together with continuous and ordinal longitudinal outcomes respectively . The corresponding R implementations are further illustrated with real examples. The package also provides simulation functions to simulate datasets for joint modelling with continuous or ordinal outcomes under the competing risks scenario, which provide useful tools to validate and evaluate new joint modelling methods.

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Published

June 6, 2021

Received

Apr 4, 2020

DOI

10.32614/RJ-2021-028

Volume

Pages

13/1

67 - 82

Supplementary materials

Supplementary materials are available in addition to this article. It can be downloaded at RJ-2021-028.zip

Footnotes

    References

    R. M. Elashoff, G. Li and N. Li. A joint model for longitudinal measurements and survival data in the presence of multiple failure types. Biometrics, 64(3): 762–771, 2008.
    N. Li, R. M. Elashoff, G. Li and J. Saver. Joint modeling of longitudinal ordinal data and competing risks survival times and analysis of the NINDS rt-PA stroke trial. Statistics in medicine, 29(5): 546–557, 2010.

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    Citation

    For attribution, please cite this work as

    Wang, et al., "The R Journal: JMcmprsk: An R Package for Joint Modelling of Longitudinal and Survival Data with Competing Risks", The R Journal, 2021

    BibTeX citation

    @article{RJ-2021-028,
      author = {Wang, Hong and Li, Ning and Li, Shanpeng and Li\*, Gang},
      title = {The R Journal: JMcmprsk: An R Package for Joint Modelling of Longitudinal and Survival Data with Competing Risks},
      journal = {The R Journal},
      year = {2021},
      note = {https://doi.org/10.32614/RJ-2021-028},
      doi = {10.32614/RJ-2021-028},
      volume = {13},
      issue = {1},
      issn = {2073-4859},
      pages = {67-82}
    }